COURSE DESCRIPTIONS

You can follow the links to obtain detailed syllabi for the respective course.

PHOL 430
Advanced Structural Biology I (3)

Paul Carey 368.0031
Provides students with an in-depth introduction to biophysical techniques used to quantify macromolecular structures. A major part of the course will deal with the use of nuclear magnetic resonance to derive 3-D structures of macromolecules in solution. Other topics include electron spin resonance, absorption, fluorescence and circular dichroism spetros copies, Raman and infrared spectroscopies and methods used in modeling. Taken with "Advanced Methods in Structural Biology II". This course will provide an extensive overview for graduate students specializing in structural biology. The course will be mostly lecture based. This course is cross-listed with CHEM 430, PHRM 430, and BIOC 430.

PHOL 451
Independent Study in Physiology (credit as arranged)

Staff
A guided program of study using physiology textbooks, research reviews, and original research articles. An independent laboratory research project may also be included. (1-36 credits)

PHOL 456 (syllabus in PDF format)
Proteins and Nucleic Acids (3)

Patrick Wintrode 368.3178
The goal of this course is to provide a basic working knowledge of protein structure/function and molecular biology. The course begins with a discussion of protein structure and enzyme catalysis followed by protein purification and characterization. The course then addresses concepts relating to the application of modern molecular biology techniques. Students are taught how to clone genes and use these clones in animals-and cell-based studies. The overall goal is to provide students with an understanding of proteins and genetic approaches that can be used in experimental work and to facilitate comprehension of the scientific literature. (3 credits - twice weekly- 1.5 h/lecture)

PHOL 466 (syllabus in PDF format)
Cell Signaling (3)

George Dubyak 368.5523
This is an advanced lecture/journal/discussion format course that covers cell signaling mechanisms. Includes are discussions of neurotransmitter-gated ion channels, growth factor receptor kinases, cytokine receptors, G protein-coupled receptors, steroid receptors, heterotrimeric G proteins, ras family GTPases, second messenger cascades, protein kinase cascades, second messenger regulation of transcription factors, microtubule-based motility, actin/myosin-based motility, signals for regulation of cell cycle, signals for regulation of apoptosis. (3 credits - twice weekly - 2 h/lecture)

PHOL 468 (syllabus in PDF format)
Membrane Physiology (3)

Calvin Cotton/Corey Smith 368.4603, 368.3487
This student-guided discussion/journal course focuses on biological membranes. Topics discussed include termodynamics and kinetics of membrane transport, oxidative phosphorylation and bioenergetics, electro-physiology of excitable membranes, and whole and single channel electrophysiology, homeostasis and pH regulation, volume and calcium regulation. (3 credits - twice weekly 1.5 h/lecture)

PHOL 475 (syllabus in PDF format)
Protein Biophysics (3)

Matthias Buck 368.8651
This course focuses on in-depth understanding of the molecular biophysics of proteins. Structural, thermodynamic and kinetic aspects of protein function and structure-function relationships will considered at the advanced conceptual level. The application of these theoretical frameworks will be illustrated with examples from the literature and integration of biophysical knowledge with description at the cellular and systems level. The format consists of lectures, problems sets, and student presentations. A special emphasis will be placed on discussion of original publications. (3 credits - twice weekly)

PHOL 476
Cell Biophysics (3)

Ulrich Hopfer 368.2878
This course focuses on a quantitative understanding of cellular processes. It is designed for students who feel comfortable with and are interested in analytical and quantitative approaches to cell biology and cell physiology. Selected topics in cellular biophysics will be covered in depth. Topics include theory of electrical and optical signal processing used in cell physiology, thermodynamics and kinetics of enzyme and transport reactions, single ion channel kinetics and excitability, mechanotransduction, and transport across polarized cell layers. The format consists of lectures, problem sets, computer simulations, and discussion of original publications. The relevant biological background of topics will be provided appropriate for non-biology science majors. (3 credits-twice weekly)

PHOL 480 (syllabus in PDF format)
Physiology of Organ Systems (3)

Andrea Romani 368.5518
This course presents an advanced introduction to the fundamental physiological principles governing the major organ systems in mammals. The function of the nervous, endocrine, digestive, muscle, circulatory, respiratory, and urinary systems are discussed. At the conclusion of the semester, integrative aspects of the major organ systems will be illustrated through consideration of exercise and high altitude physiology. (3 credits - twice weekly - 1.5 h/lecture)

PHOL 498
Physiology and Biophysics Departmental Seminar (1)

Robert Harvey 368.5521 Staff assigned each academic year
Weekly one-hour reviews by faculty or invited speakers on their research. Students present literature reviews or summaries of their research.

PHOL 505
Laboratory of Research Rotation (3)

Thomas Egelhoff 368.6971
One-semester experience in a selected faculty research laboratory designed to introduce the student to all aspects of modern laboratory research including the design, execution, and analysis of original experimental work.

PHOL 512
Skeletal Biology (3)

Edward Greenfield 368.1331
This is an advanced graduate level course for students interested in the morphogenesis, structure, function, and maintenance of the skeletal system taught jointly by faculty from Case Western Reserve University (CWRU), Cleveland Clinic Foundation (CCF), and the Northeastern Ohio Universities College of Medicine (NEOUCOM).  It will meet twice per week for 90 minutes per session (Wednesdays and Fridays 3:30-5PM).  The format will include an overview of the topic by the responsible faculty, followed by a discussion of important papers on the topic.  The students will be expected to discuss the papers for each session and grading will be based on those discussions.  The intent of the course is to enable students to understand the important problems in skeletal biology and both classical and modern approaches for solving them.  (3 credits - twice weekly - 1.5 h/lecture)

PHOL 514
Advanced Cardiovascular Physiology (3)

Robert Harvey 368.5521
The goal of this course is to provide the student with a solid foundation in cardiovascular physiology and pathophysiology. The course will begin by providing a solid foundation in the structure, phenotype and function of cardiac and vascular muscle. In addition, elctrophysiology and metabolism will be addressed. After covering the basic physiology, more advanced topics, such as pathophysiology, will covered using a journal club format. (3 credits - twice weekly - 1.5 hrs/class)

PHOL 517
Optical Microscopy and Imaging for Biologists

Ulrich Hopfer 368.2878 & A. Nieminen
This intense lecture and laboratory-based course will cover basic concepts of light microscopy and introduce advanced techniques relevant to modern cell and molecular biology. Students will gain extensive hands-on experience with state-of-the-art equipment for optical imaging guided by experienced academic instructors. The latest and most advanced instrumentation for light microscopy, image detection, and computerized image analysis will be available for us in the laboratory part of this course.

PHOL 519
Advance Pulmonary Physiology (3)

Thomas Nosek 368.3443
This course is designed to integrate systemic, cellular and molecular aspects of cardio-respiratory systems in physiological and pathophysiological states. The course requires prior knowledge of basic physiology of the cardiovascular systems. Extensive student participation is required. Instructors provide a brief overview of the topic followed by presentation and critical appraisal of recent scientific literature by students. (3 credits - twice weekly - 1.5 h/lecture)

PHOL 522
Special Topics in Cardiac Electrophysiology (3)

Robert Harvey 368.5521
Introduction to current research topics in cardiac physiology, including ionic basis for the generation of the cardiac action potential, propagation of action potentials in cardiac nerves. (3 credits)

PHOL 523
Advanced NMR Spectroscopy in Structural Biology (3)

Frank Sönnichsen 368.5405
An advanced course on NMR spectroscopy designed for advanced students interested in structural biology. (3 credits)

PHOL 530 (syllabus in PDF format)
Advanced Techniques in Physiological and Biophysical Sciences (3)

Witold K. Surewicz 368.0139
This lecture/discussion/journal course focuses on techniques in the physiological sciences. Topics include spectroscopy, microscopy, and electrophysiology. The theory and practice are covered with an emphasis on examples taken from the scientific literature. (3 credits - twice weekly - 1.5 h/lecture)

PHOL 531
Transcription Factor Regulation of Gene Expression(2)

Richard Eckert 368.5530
A reading and presentation course designed to expand knowledge of the mechanisms that regulate transcription factor activity and the mechanisms whereby transcription factors regulate gene expression. The major transcription factor classes are covered (i.e. API, Spl, NFkappaB, POU domain, etc.). Students are required to summarize a group of manuscripts that focus on a particular transcription factor signaling process and coherently present this information in class. (2 credits)

PHOL 532
Microscopy- Principles and Application (1)

Richard Eckert 368.5530 & Ann Marie Broome
This course provides the student with both didactic lectures and hands on experience in the design, construction and application of numerous types of optical microscopy. Starting with basic optical theory, the course advances through transmitted, fluorescence, confocal, and finally, multiphoton microscopy, and provides the foundation for advanced optical microscopy applications and training. Subjects addressed will include: sample selection and preparation; microscope specifications, selection and set-up; design and layout of microscopy spaces; function and use; imaging and photomicrography; techniques and limitations; documentation and analysis; and introduction to specialized applications. (1 credit)

PHOL 601
Research (credit as arranged)

Staff
Cellular physiology laboratory research activities that are based on faculty and student interests. (1-36 credtis)

PHOL 651
Thesis (M.S.) (credit as arranged)

Staff

PHOL 701
Dissertation (Ph.D.) (credit as arranged)

Staff

 
Physiology and Biophysics at Case School of Medicine Cleveland, Ohio 44106-4970 800 289.6328 DPB-Web@Case.edu
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